Our seminar

Laboratory seminars (PV273 in the course catalog) on Wednesday, 15:00-16:00, A505, FI MU, Botanická 68

The format of standard lectures: 30-40 minutes presentation + 15 minutes for questions, slides in English, presentation in English or Czech based on audience.

  • 3.3.2021
    Mgr. Martin Friák, Ph.D.
    Applications of quantum computers in chemistry, physics and materials science
    Abstract: One of the most important applications of quantum computing is solving classically intractable problems in chemistry, physics, and materials science. As calculations on classical (super-)computers are currently reaching their limits, emerging quantum technologies may help answer unresolved questions related to high-temperature superconductivity, new batteries, transition metal catalysis, or biochemical reactions and drug design. Therefore, significant attention has been recently paid to quantum-computer calculations of the electronic structure of materials. While the corresponding progress has been impressive, numerous major challenges remain. Albeit promising, quantum computers are still in their infancy. Currently, there are only a few working prototypes worldwide with very limited performance. As quantum computers are fundamentally different from classical ones, many basic algorithms need to be developed.
    The talk will summarize the current status of quantum-computer calculations in chemistry, including increasing academic and industrial activities worldwide. Next, the prominent aspects of these calculations will be illustrated on calculations of selected small systems such as the H- ion or the H2 molecule. For these, we have recently performed an extensive set of calculations on quantum processors and their classical simulators using the IBM Quantum Experience platform. Further, special attention will be paid to the impact that (i) different set-ups of quantum circuits, (ii) applied computational methods, and (iii) real (i.e., noisy) realizations of quantum processors have on the calculated results. The talk will close with an outlook on quantum computing in physics and materials science.
  • 10.3.2021
    Search at Sitola: overview presentations about search methodologies in Sitola
    Hana Rudová: Problem-specific search

  • 17.3.2021
    RNDr. Miloš Liška, Ph.D.
    Are videoconferences safe?
    Abstract: With the onset of COVID-19 pandemics, video communication has become a staple in our personal and business interactions. A trend is to provide videoconferencing platforms as simple and easy to use as possible without bothering users with a plethora of different settings and options. That being said, the question is if videoconferences, as we know and use them today, are secure and safe.
    In this talk, we first provide an overview of videoconferencing platforms and tools provided by CESNET and generic concepts of security and safety in terms of these tools. In the second part of the talk, we show examples of how not to set up and use videoconferences. The talk will be concluded with a walkthrough of best practices and options to make videoconferencing safe.
  • 24.3.2021
    Search at Sitola: overview presentations about search methodologies in Sitola
    Jiří Filipovič: Using searching algorithms in projects of the HPC group
  • 21.4.2021
    RNDr. Vladimír Míč, Ph.D., RNDr. Tomáš Raček
    Protein chain similarity search
    Abstract: Proteins are essential parts of every living organism. As their 3D structure largely influences their function, biologists are interested in finding similar protein subunits in different proteins, even from other species. In this talk, we will present our 1-month-old, still unpublished web application for efficient search in the world’s largest protein database for the first time. We will describe the standardized similarity measure for these protein subunits and then discuss the challenges of the similarity searching in this very recent complex data. We will also briefly sketch our approaches to address these challenges. Finally, we will conclude the talk with a comparison of our approach and the currently used one to illustrate that our search is about 20 times faster (including the visualizations) while decreasing the average searching accuracy to 94%.
  • 28.4.2021
    Ing. Jana Hozzová, Ph.D.
    How we have made our data publicly available, slides in PDF
    Abstract: This year, our research group published a dataset via the Mendeley repository and Data in Brief article. It was the first time we made available such a comprehensive dataset with associated scripts, and we gathered a few pieces of information, tips, recommendations, and experiences worth sharing. In this talk, I will cover the whole process from deciding to publish data, choosing a way to do so, preparing and polishing them, documenting their details to actually making them publicly available.
  • 5.5.2021
    Marek-Martin Matyska
    Data driven game design
    Abstract: The talk will provide an introduction to the various types of data sets that we collect and utilize while we develop our games, how do they differ, and what kind of challenges/advantages they bring to the table. We will also open up the moral issues of utilizing big data and how does it affect the entire application ecosystem.
  • 12.5.2021
    prof. RNDr. Jiří Barnat, Ph.D.
    RoFI — Open-hardware platform of distributed metamorphic robots
    Abstract: In the talk, we will introduce metamorphic robots. In particular, we will talk about a modular metamorphic RoFI platform that is being developed at FI MU. Besides the general view on the platform, we will also present some concrete goals to achieve with the platform as well as problems to be solved. Due to the nature of the RoFIbots, the platform is a nice experimental environment for ad-hoc networking, reconfiguration plan scheduling, etc., which might be of interest to Sitola Laboratory members.
  • 19.5.2021
    Discussion about the future Sitola
  • 26.5.2021
    Bc. Aneta Moravčíková

Past seminars

Contact: Hana Rudová

(c) 2018 SITOLA, Administration